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CS 580: Medical Informatics

Objectives

Prerequisites

Syllabus

Introduction 1.5 hours
Molecular biology basics
DNA, RNA, Protein
Genomics 1.5 hours
Restriction mapping 5.0 hours
Map assembly 5.0 hours
Sequence comparison 5.0 hours
Exact and inexact matching
Global and local alignment
Multiple alignment, Dynamic time-warping, FASTA, BLAST 5.0 hours
Protein structure prediction and matching 5.0 hours
Gene prediction 6.0 hours
Hidden Markov Models
Other modeling techniques
Total 45 hours

Edited March 2006 (html, css checks)